Coding

Part:BBa_K3747116

Designed by: Sophieke Lems   Group: iGEM21_Wageningen_UR   (2021-10-20)


Periplasmic nitrate reductase H (napH) from Paracoccus denitrificans DSM 413

This gene is part of the nap operon from P. denitrificans DSM 413. Nap is the first enzyme of the denitrification pathway, converting nitrate (NO3-) into nitrite (NO2-). NapH encodes a putative ferredoxin. NapH can oxidize quinones and subsequently transfer the generated electrons to NapG. NapG redirects them to NapC, which transfers them to the catalytic subunit NapA [1].

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 801
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 801
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 801
    Illegal BamHI site found at 200
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 801
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 801
    Illegal NgoMIV site found at 25
    Illegal NgoMIV site found at 231
    Illegal NgoMIV site found at 251
  • 1000
    COMPATIBLE WITH RFC[1000]


Reference

[1] Yang, J., Feng, L., Pi, S., Cui, D., Ma, F., Zhao, H. ping, & Li, A. (2020). A critical review of aerobic denitrification: Insights into the intracellular electron transfer. Science of the Total Environment, 731, 139080. https://doi.org/10.1016/j.scitotenv.2020.139080

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Categories
Parameters
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